p-value: | 1e-3 |
log p-value: | -8.418e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 7.14% |
Number of Background Sequences with motif | 0.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 6.0 +/- 0.0bp |
Average Position of motif in Background | 34.5 +/- 9.7bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LIN54/MA0619.1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ATAAAATTCAAAC ----NATTCAAAT |
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PH0046.1_Hoxa10/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATAAAATTCAAAC TAGGTAATAAAATTCA--- |
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PH0078.1_Hoxd13/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATAAAATTCAAAC CTACCAATAAAATTCT--- |
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PH0075.1_Hoxd10/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATAAAATTCAAAC AATGCAATAAAATTTAT-- |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATAAAATTCAAAC AGAGCCATAAAATTCG--- |
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Nr2e1/MA0676.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATAAAATTCAAAC --AAAAGTCAA-- |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATAAAATTCAAAC ACGGCCATAAAATTAAT-- |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATAAAATTCAAAC --CGGTTTCAAA- |
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PH0057.1_Hoxb13/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATAAAATTCAAAC AACCCAATAAAATTCG--- |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------ATAAAATTCAAAC AAAGGTAATAAAATTT---- |
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