Information for 5-GCCGTCAGTC (Motif 21)

A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A C T G C G T A A G T C A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.418e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCGTCAGTC--
SCTGTCAVTCAV
 A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCGTCAGTC--
NCTGTCAATCAN
 A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCGTCAGTC-
GSCTGTCACTCA
 A C G T A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTCAGTC
TGACGTCA---
 A C G T A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGTCAGTC--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCGTCAGTC
-ACGTCA---
 A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTCAGTC--
NTGCCCTTGGGCGN
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCGTCAGTC--
----TCAGTCTT
 A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCCGTCAGTC-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTCAGTC-
RGCCATYAATCA
 A C G T A C T G A G T C A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A