p-value: | 1e-11 |
log p-value: | -2.727e+01 |
Information Content per bp: | 1.803 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 21.43% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.0 +/- 26.2bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0111.1_Nkx2-2/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GDTACTTTTAAGAGBG--- --NANTTTCAAGTGGTTAN |
|
|
|
DMRT3/MA0610.1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GDTACTTTTAAGAGBG NTTGATACATT-------- |
|
|
|
PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GDTACTTTTAAGAGBG ACTCCAAGTACTTGGAA----- |
|
|
|
PH0068.1_Hoxc13/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GDTACTTTTAAGAGBG-- --NAATTTTACGAGNTNN |
|
|
|
PB0050.1_Osr1_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GDTACTTTTAAGAGBG TNNTGCTACTGTNNNN---- |
|
|
|
PH0113.1_Nkx2-4/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GDTACTTTTAAGAGBG--- ---AATTTCAAGTGGCTTN |
|
|
|
HOXC13/MA0907.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GDTACTTTTAAGAGBG ----NTTTTACGAGN- |
|
|
|
PH0115.1_Nkx2-6/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GDTACTTTTAAGAGBG--- ---AATNTTAAGTGGNTNN |
|
|
|
Nkx2-5/MA0063.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GDTACTTTTAAGAGBG -------TTAATTG-- |
|
|
|
NKX2-3/MA0672.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GDTACTTTTAAGAGBG ------NTCAAGTGGN |
|
|
|