Information for 7-CAADHMCACGATCCTG (Motif 9)

A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
Reverse Opposite:
A T G C G T C A A C T G C T A G C T G A G C A T G A T C T A C G C G A T A C T G A C G T C G A T G A C T A C G T A C G T T A C G
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.613
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.00%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.7 +/- 25.3bp
Average Position of motif in Background65.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAADHMCACGATCCTG
CAAGGHCANV------
 A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAADHMCACGATCCTG
NTCAAGGTCA--------
 A C G T A C G T A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAADHMCACGATCCTG
BTCAAGGTCA--------
 A C G T A C G T A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CAADHMCACGATCCTG--
--------ACATCCTGNT
 A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CAADHMCACGATCCTG
AAGTTCAAGGTCAGC------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CAADHMCACGATCCTG--
-----GCACGTGTCNNNN
 A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CAADHMCACGATCCTG
AACAATAACATTGTT---
 A C G T A C G T A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CAADHMCACGATCCTG
----GGCACGTGNC--
 A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
A C G T A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CAADHMCACGATCCTG
--GKVTCADRTTWC--
 A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAADHMCACGATCCTG
-AAGGTCAC-------
 A G T C G T C A G T C A C T A G G C A T G T C A A G T C C G T A A T G C C A T G C G T A A G C T G A T C G T A C A C G T A T C G
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T