Information for 19-TTGACTAACA (Motif 41)

A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.030e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background35.0 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTGACTAACA--
BTGABTGACAGS
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTGACTAACA--
NTGATTGACAGN
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGACTAACA---
-TGAGTGACAGSC
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTGACTAACA
-TGACTCA--
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGACTAACA-
DATGASTCATNN
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TTGACTAACA-
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGACTAACA
GTTAACTAGN-
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTGACTAACA--
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGACTAACA
ATGASTCATH
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGACTAACA
RATGASTCAT-
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T