Information for 18-AGGCTTTTAATCT (Motif 29)

C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C T G A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.723e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AGGCTTTTAATCT
-----TTTAAT--
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AGGCTTTTAATCT-
------TTAATCCT
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AGGCTTTTAATCT-
------YTAATCCY
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGGCTTTTAATCT-
----TTTGAAACCG
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGCTTTTAATCT--
---CCTTTGATCTTT
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGGCTTTTAATCT-
------TTAATCCC
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCTTTTAATCT---
AATCCCTTTGATCTATC
 A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGGCTTTTAATCT-
------TTAATCCG
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGCTTTTAATCT--
AACCCTTTGATCTTT
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGCTTTTAATCT-
---ATATTAATTAA
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A