Information for 8-RGATCYCGCW (Motif 28)

C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A
Reverse Opposite:
C G A T A C T G A G T C C T A G C T A G A C T G C G T A A C G T A T G C G A C T
p-value:1e-3
log p-value:-7.723e+00
Information Content per bp:1.826
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 34.0bp
Average Position of motif in Background62.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:RGATCYCGCW
ACATCCTGNT
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RGATCYCGCW-
-GGTCCCGCCC
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A A C G T
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGATCYCGCW
NYTTCCCGCC
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGATCYCGCW-----
GGNTCTCGCGAGAAC
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGATCYCGCW-
NNTTCCCGCCC
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RGATCYCGCW
ATAATCCC---
 A C G T C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RGATCYCGCW--
--TTCCCGCCWG
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A A C G T A C G T
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RGATCYCGCW
TACATCCGGGT
 A C G T C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RGATCYCGCW---
-TTTCCCGCCMAV
 C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A A C G T A C G T A C G T
A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RGATCYCGCW-----
TCGTACCCGCATCATT
 A C G T C T G A A T C G C G T A C G A T A G T C G A T C A G T C A C T G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T