Information for 4-GGCCGGGTGA (Motif 26)

A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A G T C A G T C A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.723e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background80.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGCCGGGTGA----
CGCGCCGGGTCACGTA
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCGGGTGA----
AGAGCGGGGTCAAGTA
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCGGGTGA-
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCCGGGTGA-
-GTGGGGTGAT
 A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCCGGGTGA-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCCGGGTGA--
---CAGGTGAGG
 A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCCGGGTGA-
-NNCAGGTGNN
 A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCGGGTGA-
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCGGGTGA
AGGCCTAG---
 A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCCGGGTGA-
-KCCACGTGAC
 A C T G A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C