Information for 13-CTGBGAACAGAGA (Motif 23)

A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
Reverse Opposite:
C G A T A G T C A G C T A G T C A C G T A T C G A G C T A C G T G T A C T A C G A G T C C G T A A T C G
p-value:1e-4
log p-value:-9.924e+00
Information Content per bp:1.785
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.0 +/- 11.0bp
Average Position of motif in Background52.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGBGAACAGAGA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTGBGAACAGAGA
-----CACAGN--
 A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGBGAACAGAGA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGBGAACAGAGA
WDNCTGGGCA------
 A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGBGAACAGAGA
--GTAAACAG---
 A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGBGAACAGAGA-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGBGAACAGAGA
GGTGYTGACAGS--
 A C G T A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGBGAACAGAGA
CCAGGAACAG---
 A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGBGAACAGAGA
-TGTAAACAGGA-
 A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGBGAACAGAGA
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C T G G T C A C T G A A T G C C G T A A C T G C T G A T C A G C G T A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A