Information for 11-CTCASYGAATKGSCCG (Motif 12)

A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
Reverse Opposite:
A T G C C A T G A T C G A T G C A T G C G T A C T C G A G A C T G A C T A T G C T C G A A T C G C A G T T C A G T C G A T C A G
p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.533
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif35.00%
Number of Background Sequences with motif998.0
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets51.7 +/- 22.6bp
Average Position of motif in Background49.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CTCASYGAATKGSCCG
NANTTCATTGAATTA----
 A C G T A C G T A C G T A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.46
Offset:9
Orientation:reverse strand
Alignment:CTCASYGAATKGSCCG---
---------TGCCCAGNHW
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:CTCASYGAATKGSCCG
-GCAGTGATTT-----
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.45
Offset:9
Orientation:forward strand
Alignment:CTCASYGAATKGSCCG--
---------CTGCCCGCA
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.44
Offset:-3
Orientation:forward strand
Alignment:---CTCASYGAATKGSCCG
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.44
Offset:1
Orientation:forward strand
Alignment:CTCASYGAATKGSCCG
-TCAGTCTT-------
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.43
Offset:5
Orientation:reverse strand
Alignment:CTCASYGAATKGSCCG-----
-----NNNNTGACCCGGCGCG
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0177.1_Sox7_2/Jaspar

Match Rank:8
Score:0.43
Offset:-6
Orientation:reverse strand
Alignment:------CTCASYGAATKGSCCG
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.42
Offset:1
Orientation:reverse strand
Alignment:CTCASYGAATKGSCCG
-TCAGNGAGCGTGAC-
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.42
Offset:4
Orientation:reverse strand
Alignment:CTCASYGAATKGSCCG
----GTTAATGGCC--
 A G T C A G C T A G T C G T C A T A G C A G C T T A C G C G T A C T G A A G C T C A T G T A C G A T C G T A G C G T A C T A C G
A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T