Information for 8-HHTCTGVTTTGHTTGT (Motif 9)

G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
Reverse Opposite:
G C T A A T G C C T G A C G T A C A T G T A G C C G T A C G T A T C G A A C G T G T A C G T C A T A C G T C G A C A T G C A G T
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.637
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif92.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets50.3 +/- 23.1bp
Average Position of motif in Background48.3 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT
---BTVATTWGCATA-
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:HHTCTGVTTTGHTTGT
---TTCATTTGCATAT
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT
---CTCATTTGCATW-
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT-
--NWTGATTRGRTTAWN
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T A C G T
A C G T A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT
----TGATTAAATTA-
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT
------ATTTGCATAT
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:HHTCTGVTTTGHTTGT
------ATTTGCATAA
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU1F1/MA0784.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT-
---CTAATTTGCATATT
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T A C G T
A C G T A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT
-CTGTGGTTTN-----
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:HHTCTGVTTTGHTTGT
---NTGATTAAATTAN
 G C T A G A T C A G C T A T G C A C G T C A T G T C G A A C G T C G A T C G A T A T C G G A T C G C A T A G C T T A C G C G A T
A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G