Information for 6-CATTRATGAGTTWATG (Motif 7)

G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
Reverse Opposite:
A G T C G C T A C G A T C G A T C G T A G T C A A G T C A C G T A G T C G T C A G A C T A G C T C G T A G C T A A C G T A C T G
p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.636
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif49.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets82.2 +/- 5.8bp
Average Position of motif in Background51.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATTRATGAGTTWATG
AGTTATTAATGAGGTC---
 A C G T A C G T A C G T G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C A C G T A C G T A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATTRATGAGTTWATG
TTTAATTAATTAATTC---
 A C G T A C G T A C G T G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CATTRATGAGTTWATG
NNNTATTGAATTGNNN
 G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATTRATGAGTTWATG
-AAAGATGATGTCATC
 G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
A C G T C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTRATGAGTTWATG
-NTTATTGATTTTTT-
 G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CATTRATGAGTTWATG
--AAGATGATGTCAT-
 G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATTRATGAGTTWATG
--NTAATGAGCT----
 G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTRATGAGTTWATG
GACGATAATGAGCTTGC-
 A C G T A C G T G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CATTRATGAGTTWATG--
------TGATTTATGGCC
 G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATTRATGAGTTWATG
AAATTAATTGATTTNG-
 A C G T G T A C T C G A C A G T C G A T T C G A C G T A A C G T A C T G G T C A A C T G A C G T G A C T G C T A C G T A C A G T A C T G
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G A C G T