Information for 5-TGMMMWTYMMYMMSYW (Motif 5)

A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
Reverse Opposite:
C G A T C T A G A T G C A C T G A C T G C T A G A C T G A C T G C T A G C G T A C G T A C A T G A C G T A C G T A G T C G T C A
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.689
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.7 +/- 12.5bp
Average Position of motif in Background50.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGMMMWTYMMYMMSYW
TGACCTTTNCNT----
 A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGMMMWTYMMYMMSYW
NNNGTGACCTTTGNNN----
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGMMMWTYMMYMMSYW
NNNNTGACCTTTNNNN----
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGMMMWTYMMYMMSYW
TGACCTTTGACCCC--
 A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGMMMWTYMMYMMSYW
TGACCTTTGACCCC--
 A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGMMMWTYMMYMMSYW
TGACCTTTGACCCC--
 A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGMMMWTYMMYMMSYW
ATGACCTTGA-------
 A C G T A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGMMMWTYMMYMMSYW
TTGAATGAAATTCGA------
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGMMMWTYMMYMMSYW
NTGACCTTGA-------
 A C G T A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGMMMWTYMMYMMSYW
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T C A G T A C G T A C C G A T A C G T A G C T G T A C G T A C A G T C G T A C T G A C T A C G G A C T C G T A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T