Information for 25-GGABGHCCCG (Motif 48)

A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G
Reverse Opposite:
A G T C A T C G A C T G C T A G C A G T A T G C T A C G C G A T A G T C A G T C
p-value:1e-2
log p-value:-5.278e+00
Information Content per bp:1.717
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background41.1 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGABGHCCCG
GGAAATCCCC-
 A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGABGHCCCG
GGAAANCCCC
 A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGABGHCCCG---
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G A C G T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGABGHCCCG--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGABGHCCCG-----
NNNNTGACCCGGCGCG
 A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGABGHCCCG---
---GGTCCCGCCC
 A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGABGHCCCG
GGGAGGACNG-
 A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGABGHCCCG
AGGGGAATCCCCT
 A C G T A C G T A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGABGHCCCG
GGGGGAATCCCC-
 A C G T A C G T A C G T A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGABGHCCCG--
GGACCACCCACG
 A C T G C T A G G C T A A G T C A T C G G C T A A G T C A G T C A T G C A C T G A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G