Information for 16-CCTACCAATCCCCTCT (Motif 37)

A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.572e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTACCAATCCCCTCT
ACTACAATTCCC----
 A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCTACCAATCCCCTCT
----CTAATCCTCTT-
 A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTACCAATCCCCTCT
NNNAATTAATCCCCNCN
 A C G T A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTACCAATCCCCTCT
GNNNATTAATCCCTNCN
 A C G T A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTACCAATCCCCTCT--
TGGACCAATCAGCACTCT
 A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTACCAATCCCCTCT
GNNAGCTAATCCCCCN-
 A C G T A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CCTACCAATCCCCTCT
--------TCCCCA--
 A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTACCAATCCCCTCT
GANNATTAATCCCTNNN
 A C G T A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTACCAATCCCCTCT---
-ATGCCACGCCCCTTTTTG
 A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCTACCAATCCCCTCT
----SSAATCCACANN
 A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C