Information for 11-AGCACTGTATTCT (Motif 25)

C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C T G A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-8.572e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCACTGTATTCT-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGCACTGTATTCT
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCACTGTATTCT--
AGAAATGACTTCCCT
 C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCACTGTATTCT---
-CCATTGTATGCAAAT
 C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCACTGTATTCT
AAGCACTTAA----
 A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCACTGTATTCT-
GAACADWATGTTCTT
 A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AGCACTGTATTCT
TTTTAAGTACTTAAATT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCACTGTATTCT
MRSCACTYAA----
 A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGCACTGTATTCT----
-GGACTGAATTCATGCC
 C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGCACTGTATTCT
AASCACTCAA----
 A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T