Information for 2-AKWMAAAKGARASAMM (Motif 2)

C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
Reverse Opposite:
A C T G C A G T A C G T A T G C A C G T A G C T A C G T A G T C G T A C A C G T A C G T A C G T A C G T C G A T G T A C A C G T
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.807
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.7 +/- 21.9bp
Average Position of motif in Background35.3 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AKWMAAAKGARASAMM
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AKWMAAAKGARASAMM
--GAAAMTGAAACT--
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AKWMAAAKGARASAMM
-GGAAANTGAAACTNA
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AKWMAAAKGARASAMM
-GAGAACCGAAACTG-
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AKWMAAAKGARASAMM
--AGAAACGAAAGT--
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AKWMAAAKGARASAMM
AAAACAAAGG-------
 A C G T C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AKWMAAAKGARASAMM
--AAATAAGAAAAAAC
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AKWMAAAKGARASAMM
--GAAASYGAAASY--
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AKWMAAAKGARASAMM--
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AKWMAAAKGARASAMM
--GAAAGTGAAAGT--
 C G T A A C T G C G T A G T C A C G T A C G T A C G T A A C T G A C T G C G T A T C A G C G T A A T C G C G T A G T A C G T A C
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T