Information for 10-AATAGAAHAVVAC (Motif 17)

G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
Reverse Opposite:
C A T G A C G T A C G T A C T G A G C T C G T A A G C T G C A T T A G C G C A T G T C A G C A T A C G T
p-value:1e-3
log p-value:-9.004e+00
Information Content per bp:1.678
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1468.8
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets32.6 +/- 14.6bp
Average Position of motif in Background50.6 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATAGAAHAVVAC---
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AATAGAAHAVVAC-
ATATCAAAACAAAACA
 A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATAGAAHAVVAC--
CAAACAACAACACCT
 G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AATAGAAHAVVAC
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AATAGAAHAVVAC
AAATAAGAAAAAAC
 A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AATAGAAHAVVAC
AATCAATTCAATAATT-
 A C G T A C G T A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AATAGAAHAVVAC
AATATTAATAAAGA--
 A C G T A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AATAGAAHAVVAC
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AATAGAAHAVVAC
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AATAGAAHAVVAC---
AAAAAGTAAACAAAGAC
 A C G T G T C A C G T A C A G T C G T A A T C G C G T A C T G A G A C T T C G A T A G C T G C A G T C A G T A C A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C