Information for 1-CCGCCAYYTT (Motif 1)

A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T
Reverse Opposite:
T G C A T G C A T C G A T C G A C A G T T C A G A T C G T A G C T C A G T A C G
p-value:1e-16
log p-value:-3.706e+01
Information Content per bp:1.556
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.11%
Number of Background Sequences with motif541.2
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets49.2 +/- 25.4bp
Average Position of motif in Background49.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCAYYTT-
GCCGCCATCTTG
 A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCAYYTT-
GCNGCCATCTTG
 A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCGCCAYYTT
GTCCGCCATTA-
 A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CCGCCAYYTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCGCCAYYTT---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGCCAYYTT--
GCCCCGCCCCCTCCC
 A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCAYYTT
NAGCCCCGCCCCCN-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCGCCAYYTT
GCCCCGCCCCC--
 A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CCGCCAYYTT
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CCGCCAYYTT-
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G T A G C A G T C G T C A A G C T A G C T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T