Information for 3-GGGAGGGTDHAGCAGG (Motif 6)

A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T A C T G A T G C A C G T C A T G G T A C C G T A A G T C A G T C A G T C A C G T A G T C G T A C A T G C
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 25.1bp
Average Position of motif in Background48.0 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGAGGGTDHAGCAGG--
---AAGGKGRCGCAGGCA
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGGGTDHAGCAGG
GTATTGGGTGGGTAATT----
 A C G T A C G T A C G T A C G T A C G T A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGGGTDHAGCAGG
NATNGGGNGGGGANAN----
 A C G T A C G T A C G T A C G T A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGAGGGTDHAGCAGG
---AGGAAACAGCTG-
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGGAGGGTDHAGCAGG---
-------CACAGCAGGGGG
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGGTDHAGCAGG
GGGGNGGGGC-------
 A C G T A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGGAGGGTDHAGCAGG
GGGCGGGAAGG-----
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGGAGGGTDHAGCAGG-
-AGGGGGATTAGCTGCC
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G A C G T
A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GGGAGGGTDHAGCAGG-----
------DCHCAGCAGGRGGCC
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GGGAGGGTDHAGCAGG
------DCTCAGCAGG
 A T C G C A T G A C T G C G T A A C T G C T A G A C T G C G A T C A T G G A T C C G T A A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G