Information for 2-GAGGGGAAAG (Motif 3)

A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G
Reverse Opposite:
A T G C A G C T A C G T C G A T A T G C T A G C A T G C G A T C A C G T A T G C
p-value:1e-12
log p-value:-2.979e+01
Information Content per bp:1.648
Number of Target Sequences with motif178.0
Percentage of Target Sequences with motif19.73%
Number of Background Sequences with motif5284.7
Percentage of Background Sequences with motif11.27%
Average Position of motif in Targets50.4 +/- 26.2bp
Average Position of motif in Background49.4 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGAAAG
GGAGGGGGAA-
 A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAAG
-AGAGGAA--
 A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGGGAAAG
-TGGGGA---
 A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGGAAAG-
GAAAGTGAAAGT
 A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGGGGAAAG----
TAGGGCAAAGGTCA
 A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G A C G T A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGGGAAAG---
AGAAAGTGAAAGTGA
 A C G T A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGAAAG-
GGAAGTGAAAST
 A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GAGGGGAAAG
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGAAAG----
GTAGGGCAAAGGTCA
 A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G A C G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGGGGAAAG
CGGAAGTGAAAC
 A C G T A C G T A T C G T G C A C T A G T A C G A T C G T A C G G C T A T G C A C T G A T A C G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C