Information for 11-GATCCTGGCT (Motif 19)

A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A A C T G A C T G C G T A C G A T A G T C
p-value:1e-7
log p-value:-1.622e+01
Information Content per bp:1.946
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif51.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets56.2 +/- 26.6bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGCT
ACATCCTGNT-
 A C G T A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GATCCTGGCT
----TTGGCA
 A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCT--
---NTTGGCANN
 A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GATCCTGGCT-
------NGCTN
 A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GATCCTGGCT
NNAYTTCCTGHN-
 A C G T A C G T A C G T A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATCCTGGCT
CTGTTCCTGG--
 A C G T A C G T A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GATCCTGGCT--
----TWGTCTGV
 A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GATCCTGGCT-
-GGTCTGGCAT
 A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCT-
---CTTGGCAA
 A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GATCCTGGCT
ATAATCCC----
 A C G T A C G T A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C T G A G T C A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T