Information for 6-CGCRCTCAMTGKM (Motif 12)

G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
Reverse Opposite:
C A G T G T A C A G T C C G T A A C T G A C G T A C T G C G T A A C T G A G C T A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 19.8bp
Average Position of motif in Background49.1 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGCRCTCAMTGKM-----
--CAATCACTGGCAGAAT
 G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCRCTCAMTGKM
AASCACTCAA----
 A C G T G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCRCTCAMTGKM
AGCCACTCAAG---
 A C G T G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCRCTCAMTGKM
AAGCACTTAA----
 A C G T G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCRCTCAMTGKM
NSCACTYVAV---
 G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCRCTCAMTGKM--
CTCACACAATGGCGC
 G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGCRCTCAMTGKM
AGCGGCACACACGCAA
 A C G T A C G T A C G T G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCRCTCAMTGKM
RGGGCACTAACY---
 A C G T A C G T G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCRCTCAMTGKM
MRSCACTYAA----
 A C G T G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGCRCTCAMTGKM
-GCACTTAA----
 G T A C A C T G A G T C T C G A A G T C A C G T A G T C C G T A G T A C A C G T A C T G A C T G G T C A
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T