p-value: | 1e-6 |
log p-value: | -1.470e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.3 +/- 17.6bp |
Average Position of motif in Background | 5.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGCTGCTATG--- NCCGTTGCTANGNGN |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGCTGCTATG--- NNCGTTGCTATGGNN |
|
|
|
PB0054.1_Rfx3_1/Jaspar
Match Rank: | 3 |
Score: | 0.70 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CGCTGCTATG------- NTNNNNNGTTGCTANGGNNCANA |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGCTGCTATG- CTGTTGCTAGGS |
|
|
|
PH0158.1_Rhox11_2/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CGCTGCTATG--- AGGACGCTGTAAAGGGA |
|
|
|
Rhox11/MA0629.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CGCTGCTATG--- AAGACGCTGTAAAGCGA |
|
|
|
PH0157.1_Rhox11_1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CGCTGCTATG--- AAGACGCTGTAAAGCGA |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGCTGCTATG CCCCCTGCTGTG |
|
|
|
Rfx1/MA0509.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGCTGCTATG----- -GTTGCCATGGNAAC |
|
|
|
POL010.1_DCE_S_III/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGCTGCTATG NGCTN----- |
|
|
|