Information for 18-CCACCCAGCAGGA (Motif 24)

G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A
Reverse Opposite:
A C G T A G T C A T G C A C G T A C T G A T G C A C G T A T C G A C T G A C T G A C G T A C T G A C T G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif34.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.4 +/- 21.6bp
Average Position of motif in Background50.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CCACCCAGCAGGA--
CCACACAGCAGGAGA
 G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCACCCAGCAGGA--
CCACACAGCAGGAGA
 G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCACCCAGCAGGA--
---CACAGCAGGGGG
 G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CCACCCAGCAGGA
ANNTNCCCACCCANNAC--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACCCAGCAGGA----
--DCHCAGCAGGRGGCC
 G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCACCCAGCAGGA--
GAGCACAGCAGGACA
 G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCACCCAGCAGGA
--DCTCAGCAGG-
 G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCAGCAGGA
GGACCACCCACG----
 A C G T A C G T A C G T G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCACCCAGCAGGA
GGCCACACCCA------
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCACCCAGCAGGA
GGCCACACCCAN-----
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A G T A C A G T C A T G C G T C A A T C G A G T C C G T A A T C G C T A G G T C A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T