Information for 7-CCTCTCAGAYCAA (Motif 13)

G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
Reverse Opposite:
C A G T A C G T C T A G C T A G A G C T A G T C A C G T A C T G C T G A T A C G C G T A C T A G C T A G
p-value:1e-10
log p-value:-2.303e+01
Information Content per bp:1.725
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.8 +/- 27.6bp
Average Position of motif in Background53.4 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTCTCAGAYCAA
GCTGTCAA-----
 G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCAGAYCAA
AGCCACTCAAG----
 A C G T A C G T G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCTCTCAGAYCAA
AAAGACCTGTCAATCC--
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCTCTCAGAYCAA
AATTACCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTCTCAGAYCAA
CCTGTCAA-----
 G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTCTCAGAYCAA
AAGCACCTGTCAATAT--
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTCTCAGAYCAA
-YTGWCADY----
 G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTCTCAGAYCAA
AAAGACCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTCTCAGAYCAA
AACGAGCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTCTCAGAYCAA
-NTGTCAN-----
 G A T C A G T C A C G T A G T C G A C T A G T C C G T A C T A G T C G A A G T C G A T C G T C A G C T A
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T