Information for 1-GGGAGGCGGGCCAGCA (Motif 1)

A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A G C T A C T G A C T G A G T C A T G C A G T C T C A G A T G C A G T C A C G T A G T C A G T C A T G C
p-value:1e-14
log p-value:-3.399e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 19.0bp
Average Position of motif in Background69.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGAGGCGGGCCAGCA
GGGNGGGGGCGGGGC----
 A C G T A C G T A C G T A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGAGGCGGGCCAGCA
-GGGGGCGGGGC----
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGCGGGCCAGCA
TTGGCANNNTGCCAAG-
 A C G T A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGAGGCGGGCCAGCA-
GGGRAARRGRMCAGMTG
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGAGGCGGGCCAGCA
TGGCAGNCTGCCAG--
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGAGGCGGGCCAGCA
GGGGGCGGGGCC----
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGAGGCGGGCCAGCA
----AGCGCGCC----
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGGAGGCGGGCCAGCA
------TGAGTCAGCA
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGAGGCGGGCCAGCA
-TGACANARRCCAGRC
 A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGGCGGGCCAGCA
NNNNGGGGGAAGANGG------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C G T A C T A G A T C G A G T C A C T G A T C G A C T G G T A C A G T C C T G A A C T G A T G C C G T A
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T