Information for 19-CGCGGTAAGG (Motif 49)

A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A G T C A C T G
p-value:1e-3
log p-value:-6.963e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background30.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F4/MA0470.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCGGTAAGG
GGGCGGGAAGG
 A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCGGTAAGG
GGCGGGAARN
 A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCGGTAAGG--
-CAGGTAAGTAT
 A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCGGTAAGG
CWGGCGGGAA--
 A C G T A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCGGTAAGG
GGGCGGGAAGG
 A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGCGGTAAGG---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCGGTAAGG
GGCGGGAAAH
 A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCGGTAAGG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCGGTAAGG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGTAAGG-
TGGCGGGAAAHB
 A C G T A G T C A C T G A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G