Information for 8-AGGCACGGTA (Motif 33)

C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C T G A C G T A C T G A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.656e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGCACGGTA
-GGCGCGCT-
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACGGTA--------
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGCACGGTA
AAGGCAAGTGT
 A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGCACGGTA
TBGCACGCAA
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGCACGGTA------
ATGTACAGTAGCAAAG
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCACGGTA------
ATTTACAGTAGCAAAA
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCACGGTA-
-GGCACGCGTC
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AGGCACGGTA
NNAATTAGTCACGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCACGGTA
AGTCACGC--
 C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGCACGGTA
CCAGGAACAG--
 A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C G T C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T