Information for 2-VACACTCTGATTGABD (Motif 3)

T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
Reverse Opposite:
G C T A T A G C A G C T T A G C C G T A T C G A C G A T A T G C G T C A A C T G C T G A C T A G A C G T A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.713
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.7 +/- 18.8bp
Average Position of motif in Background54.5 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:VACACTCTGATTGABD
AACACTACCATTGTT-
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:VACACTCTGATTGABD
------TTGATTGN--
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:VACACTCTGATTGABD-
-----TTTGATTGATGN
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Sox1/MA0870.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:VACACTCTGATTGABD
AACAATAACATTGTT-
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:VACACTCTGATTGABD
----CNGTGATTTN--
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:VACACTCTGATTGABD--
------BTGABTGACAGS
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:VACACTCTGATTGABD-
-------TGATTGATGA
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:VACACTCTGATTGABD-----
------CTGATTGGTCNATTT
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:VACACTCTGATTGABD
-----DATGASTCAT-
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:VACACTCTGATTGABD
------ATGACTCATC
 T A C G C G T A A G T C T G C A A G T C A G C T G T A C A C G T A T C G C G T A A G C T A C G T A T C G C T G A A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C