Information for 16-MSKGWYACWCWGA (Motif 26)

G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G C G T A A C T G A C G T C T A G C G A T A G T C G T A C A T C G A C G T
p-value:1e-4
log p-value:-1.007e+01
Information Content per bp:1.798
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.5 +/- 4.5bp
Average Position of motif in Background42.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MSKGWYACWCWGA--
NAGGTCACNNTGACC
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MSKGWYACWCWGA
NCTGTCAATCAN-
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MSKGWYACWCWGA
SCTGTCAVTCAV-
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-MSKGWYACWCWGA
GSCTGTCACTCA--
 A C G T G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MSKGWYACWCWGA---
-AGGTCACCCTGACCT
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MSKGWYACWCWGA----
AAGGTCACGGTGACCTG
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:MSKGWYACWCWGA
NTTGATACATT--
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:MSKGWYACWCWGA-----
--TGACCCAGTGACCTAC
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:MSKGWYACWCWGA---
-YDGHTACAWTGTADC
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:MSKGWYACWCWGA
------ACAAAG-
 G T C A T A C G A C T G A C T G C G T A A G T C C G T A A G T C C G A T A G T C C G A T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T