Information for 15-GHVAACAATGDAAAHC (Motif 25)

C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C G T G C T A T G A C G T C A C G A T A C G T A T C G C G A T A C G T A C T G C A G T A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.689
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif136.0
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets44.2 +/- 12.5bp
Average Position of motif in Background49.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GHVAACAATGDAAAHC
ATAAACAATTAAACA-
 C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GHVAACAATGDAAAHC
------NATGGAAAAN
 C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GHVAACAATGDAAAHC
NNTNANAACAATTNNA---
 A C G T A C G T A C G T C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GHVAACAATGDAAAHC
AATGAACAATGGAATT-
 A C G T C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.56
Offset:10
Orientation:forward strand
Alignment:GHVAACAATGDAAAHC----
----------CAAATCACTG
 C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GHVAACAATGDAAAHC
TTTAGAACAATAAAAT--
 A C G T A C G T C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GHVAACAATGDAAAHC
TAGTGAACAATAGATTT-
 A C G T A C G T C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GHVAACAATGDAAAHC
------AATGGAAAAT
 C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GHVAACAATGDAAAHC
--NAACAAT-------
 C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GHVAACAATGDAAAHC
TNNAGAACAATANATNN-
 A C G T A C G T C T A G G C T A T A G C C G T A G C T A A T G C G T C A C G T A A C G T A C T G C A G T G T C A C G T A C G T A G A C T A G T C
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T