Information for 13-AVATTGCAATTTT (Motif 22)

C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A G T C A C G T A C G A T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.130e+01
Information Content per bp:1.796
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets52.5 +/- 29.3bp
Average Position of motif in Background50.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AVATTGCAATTTT---
-CCTTGCAATTTTTNN
 C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T A C G T A C G T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AVATTGCAATTTT-
NANTATTATAATTNNN
 A C G T A C G T C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AVATTGCAATTTT-
NNTAATTATAATTNNN
 A C G T A C G T C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AVATTGCAATTTT-
TTTAATTATAATTAAG
 A C G T A C G T C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AVATTGCAATTTT
-ACTTTCACTTTC
 C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AVATTGCAATTTT-
NCGTATTATAATCNTA
 A C G T A C G T C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AVATTGCAATTTT--
-NNTNNCAATATTAG
 C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T A C G T
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AVATTGCAATTTT--
-NNTNNCAATATTAG
 C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T A C G T A C G T
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AVATTGCAATTTT
GAACAATTGCAGTGTT
 A C G T A C G T A C G T C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

Sox11/MA0869.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AVATTGCAATTTT
AACAATTTCAGTGTT
 A C G T A C G T C G T A T A C G G T C A A C G T A C G T C T A G A G T C C G T A C G T A A C G T A C G T A C G T A G C T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T