Information for 1-SAAGRAYAWRMAA (Motif 2)

A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
Reverse Opposite:
A C G T C G A T A C G T A G C T C G T A A C G T C T A G A C G T A G C T A G T C A C G T A C G T A T G C
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.822
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.5 +/- 13.1bp
Average Position of motif in Background46.9 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:SAAGRAYAWRMAA
-AAGGATATNTN-
 A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:SAAGRAYAWRMAA
CAAGGHCANV---
 A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-SAAGRAYAWRMAA
TCAAGGTCAT----
 A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--SAAGRAYAWRMAA
BTCAAGGTCA-----
 A C G T A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------SAAGRAYAWRMAA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----SAAGRAYAWRMAA
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SAAGRAYAWRMAA
NTCAAGGTCA-----
 A C G T A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SAAGRAYAWRMAA
TCAAGGTCATA---
 A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SAAGRAYAWRMAA--
CGAAGCACACAAAATA
 A C G T A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SAAGRAYAWRMAA----
---AAATAAGAAAAAAC
 A T C G C G T A C G T A A C T G C T G A C G T A A G C T C G T A C G A T C T G A G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C