Information for 9-AVCTTCTDATTAGCTT (Motif 10)

C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T
Reverse Opposite:
C G T A C T G A T A C G A G T C C G A T C G T A G T C A A G C T G A C T C G T A A C T G C G T A C G T A A C T G A C G T A G C T
p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.713
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.5 +/- 19.5bp
Average Position of motif in Background41.9 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0094.1_Lhx4/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AVCTTCTDATTAGCTT--
-TAAACTAATTAGCTTTG
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T A C G T A C G T
A C G T C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

PH0032.1_Evx2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AVCTTCTDATTAGCTT-
CACCGCTAATTAGCGGT
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AVCTTCTDATTAGCTT--
-TCCACTAATTAGCGGTT
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T A C G T A C G T
A C G T G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AVCTTCTDATTAGCTT--
-ACCCCTAATTAGCGGTG
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T A C G T A C G T
A C G T G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AVCTTCTDATTAGCTT-
AANCGCTAATTAGCNNN
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

PH0027.1_Emx2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AVCTTCTDATTAGCTT-
NNCCACTAATTAGNNNT
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T A C G T
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AVCTTCTDATTAGCTT
-----NTAATGAGCT-
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AVCTTCTDATTAGCTT
-----NTAATTAG---
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T
A C G T A C G T A C G T A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AVCTTCTDATTAGCTT
----NCTAATTAGT--
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T
A C G T A C G T A C G T A C G T T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T A C G T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AVCTTCTDATTAGCTT
-----CTAATTAG---
 C T G A T C G A A G T C A C G T C G A T G T A C A C G T C G T A C T G A A C G T G C A T C G T A A C T G A T G C A G C T G C A T
A C G T A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T A C G T