Information for 2-AAYACWGKWYTTT (Motif 6)

C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A C T G A C G A T G T A C A G T C G C A T A C T G A C G T C T G A A C G T A C G T
p-value:1e-6
log p-value:-1.534e+01
Information Content per bp:1.844
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.89%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.2 +/- 30.9bp
Average Position of motif in Background58.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAYACWGKWYTTT---
AACACTGCACATTGTT
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

SOX4/MA0867.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAYACWGKWYTTT---
AACACTGCAATTGTTC
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAYACWGKWYTTT----
-NNATTGGACTTTNGNN
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAYACWGKWYTTT--
AACACTGAAATTGTT
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAYACWGKWYTTT
AAAACCGGTTTT-
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AAYACWGKWYTTT
ATAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAYACWGKWYTTT
-ACAAAGGNBCCT
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAYACWGKWYTTT
GCAAAACATTACTA-
 A C G T A C G T C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AAYACWGKWYTTT
AGAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAYACWGKWYTTT
AACAAAGG-----
 C G T A C G T A A G C T C G T A A G T C C G T A A C T G A C T G C G T A A G C T A G C T A C G T A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T