Information for 3-TTHDTAVTTAACAACH (Motif 4)

A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
Reverse Opposite:
C A T G A C T G C G A T A C G T A C T G A C G T C G A T C G T A C G T A A G T C A C G T C G T A G A C T C A G T C G T A C G T A
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.752
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.5 +/- 18.4bp
Average Position of motif in Background52.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTHDTAVTTAACAACH
GTTAATNATTAAC----
 A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTHDTAVTTAACAACH
AGTTAATGATTAACT---
 A C G T A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTHDTAVTTAACAACH
TTAATNATTAAC----
 A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTHDTAVTTAACAACH
TTAATGTTTAACC---
 A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTHDTAVTTAACAACH
TNATTATTAATTAATTA--
 A C G T A C G T A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTHDTAVTTAACAACH
NNAATTAATTAAAAANN
 A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0100.1_Lmx1a/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTHDTAVTTAACAACH
CGAATTAATTAAAAACC
 A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0091.1_Lhx1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTHDTAVTTAACAACH
NNTTATTAATTAATNCN-
 A C G T A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTHDTAVTTAACAACH
GATTATTAATTAACTTG-
 A C G T A C G T A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTHDTAVTTAACAACH----
---TCNCTTTACAGCGNNNT
 A C G T A C G T G C T A C A G T A C G T G T C A T A C G C G A T A C G T C G T A C G T A G T A C C G T A C G T A A G T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T