Information for 1-GGCYGGVAGGVAG (Motif 3)

A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
Reverse Opposite:
T G A C A C G T A C T G A G T C A G T C C G A T A C T G A G T C A G T C C T A G A C T G G T A C G T A C
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.669
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif113.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets60.0 +/- 29.7bp
Average Position of motif in Background48.9 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCYGGVAGGVAG
TGGCAGNCTGCCAG
 A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCYGGVAGGVAG---
NGTAGGTTGGCATNNN
 A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCYGGVAGGVAG-----
GGAAGGAAGGAAGGAAGG
 A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGCYGGVAGGVAG
----GGTTGGCAT
 A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCYGGVAGGVAG
GGGCGGGAAGG---
 A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCYGGVAGGVAG
CWGGCGGGAA-----
 A C G T A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGCYGGVAGGVAG
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCYGGVAGGVAG
TTGGCATGGTGCCA-
 A C G T A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCYGGVAGGVAG
GGGCGGGAAGG---
 A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCYGGVAGGVAG
CCGCCCAAGGGCAG
 A C G T A C T G A C T G G T A C G A T C C T A G C T A G T A G C C G T A C T A G C T A G T G A C G T C A A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G