Information for 7-CCGCAATTGC (Motif 9)

A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C G T C G A T A C T G G T A C C T A G A C T G
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 22.7bp
Average Position of motif in Background58.2 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCGCAATTGC
GTCCGCCATTA-
 A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCGCAATTGC----
--GGGATTGCATNN
 A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PH0024.1_Dlx5/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAATTGC---
NANNGNTAATTACCNN
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAATTGC-----
NNNGTAATTACNNATA
 A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCGCAATTGC
AAACCGCAA----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAATTGC---
ATNNACTAATTACTTT
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGCAATTGC-
-CGCAGCTGCG
 A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PH0009.1_Bsx/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGCAATTGC-----
CAGGTAATTACCTCAG
 A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCGCAATTGC
AAACCGCAAA---
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGCAATTGC--
AACACTGCAATTGTTC
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C