Information for 3-CCGTGAVTGAGGGTGA (Motif 4)

G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
Reverse Opposite:
C A G T A G T C C G T A A G T C G T A C A G T C C G A T A G T C G T C A A G T C C G A T A G T C C G T A G T A C C T A G A C T G
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.751
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 18.5bp
Average Position of motif in Background38.0 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGTGAVTGAGGGTGA
NCGTGACN--------
 G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCGTGAVTGAGGGTGA
--GTGGGGGAGGGG--
 G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGTGAVTGAGGGTGA
GGACGTGC----------
 A C G T A C G T G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGAVTGAGGGTGA
NCACGTGACN--------
 A C G T A C G T G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGTGAVTGAGGGTGA
RTACGTGC----------
 A C G T A C G T G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCGTGAVTGAGGGTGA
ACTATGAATGAATGAT-
 A C G T G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCGTGAVTGAGGGTGA
---TGCGTGGGYG---
 G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCGTGAVTGAGGGTGA--
-NTTNTATGAATGTGNNC
 G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCGTGAVTGAGGGTGA
CACGTG-----------
 A C G T G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCGTGAVTGAGGGTGA
GGGTACGTGC----------
 A C G T A C G T A C G T A C G T G T A C A G T C A C T G A C G T A C T G C G T A T A C G A C G T A C T G C G T A C T A G A C T G A C T G C G A T C T A G G T C A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T