Information for 6-RYKSYCKCTMKRKRWK (Motif 8)

C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
Reverse Opposite:
G T C A C G A T A G T C G T A C A G C T G T C A A C T G C G T A A C T G G T C A A C T G C T A G A T G C G T C A C T G A A G C T
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.705
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.0 +/- 25.7bp
Average Position of motif in Background51.4 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RYKSYCKCTMKRKRWK
-ACCACTCTCGGTCAC
 C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RYKSYCKCTMKRKRWK
---NSCACTYVAV---
 C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-RYKSYCKCTMKRKRWK
NYTTCCCGCC-------
 A C G T C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RYKSYCKCTMKRKRWK
--NGTCCCNNGGGA--
 C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---RYKSYCKCTMKRKRWK
NNAATTCTCGNTNAN----
 A C G T A C G T A C G T C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-RYKSYCKCTMKRKRWK
NCTTCCCGCCC------
 A C G T C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RYKSYCKCTMKRKRWK
--AASCACTCAA----
 C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----RYKSYCKCTMKRKRWK
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:RYKSYCKCTMKRKRWK
----TCTCGCGAGAAT
 C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-RYKSYCKCTMKRKRWK
NTCNTCCCCTATNNGNN
 A C G T C T G A A G C T A C G T A T C G A G T C A G T C A C G T A G T C A C G T G T A C A C G T T C A G A C T G C T A G C G T A A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A