Information for 4-SSYCKGRMSKTGCTGW (Motif 5)

A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A C T G A G T C C G T A G T A C A T G C A C G T A G C T A G T C G T A C C T A G C T G A A T C G A T G C
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.784
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 32.4bp
Average Position of motif in Background72.2 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW-
------AATTTGCTGAC
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.63
Offset:10
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW----
----------TGCTGACTCA
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:SSYCKGRMSKTGCTGW-----
------AAANTGCTGACTNAG
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW--
------AAAATGCTGACT
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW------
-----AAATTTGCTGACTTAGA
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:SSYCKGRMSKTGCTGW----
-----AAAWWTGCTGACWWD
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:SSYCKGRMSKTGCTGW------
----NAAAANTGCTGACTCAGC
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:11
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW-
-----------GCTGTG
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW--
--------CCTGCTGAGH
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:SSYCKGRMSKTGCTGW---
----TAAAAATGCTGACTT
 A T C G A T G C A G C T A G T C A C T G A C T G C T G A T G A C A T C G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T