Information for 15-CACTGACGAA (Motif 41)

A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.095e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background44.5 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACTGACGAA----
GAATGACGAATAAC
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CACTGACGAA
--ATGACGTA
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACTGACGAA
---TGACGT-
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CACTGACGAA--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACTGACGAA
RGGGCACTAACY--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTGACGAA-
-TATGACGTAA
 A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A A C G T
A C G T A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CACTGACGAA-
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACTGACGAA
AAGCACTTAA---
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACTGACGAA----
ACCGTGACTAATTNN
 A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACTGACGAA
ACCACTTAA---
 A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C T G C G T A C G T A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T