Information for 6-HCAGAGAVCAGGG (Motif 15)

G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
Reverse Opposite:
G T A C G A T C G T A C A C G T A C T G A C G T C G A T A G T C C G A T A G T C A C G T A C T G C A G T
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.757
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif137.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets60.5 +/- 7.4bp
Average Position of motif in Background47.6 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------HCAGAGAVCAGGG
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--HCAGAGAVCAGGG
TGACANARRCCAGRC
 A C G T A C G T G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:HCAGAGAVCAGGG
-CAAAGGTCAG--
 G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----HCAGAGAVCAGGG
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:HCAGAGAVCAGGG
---GTAAACAG--
 G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:HCAGAGAVCAGGG
--TGTAAACAGGA
 G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-HCAGAGAVCAGGG
CACAGN--------
 A C G T G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:HCAGAGAVCAGGG
TATGTAAACANG-
 G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:HCAGAGAVCAGGG
-AAGTAAACAAA-
 G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:HCAGAGAVCAGGG
-NDGTAAACARRN
 G C T A A G T C C G T A A C T G C G T A C T A G C G T A T C G A A G T C C G T A A C T G C T A G A C T G
A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A