Information for 4-ACACABTAABCAH (Motif 12)

C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
Reverse Opposite:
C G T A A C G T A T C G T A C G A C G T A G C T C G T A T A C G A C G T C T A G A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.786
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.7 +/- 28.5bp
Average Position of motif in Background59.6 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACACABTAABCAH
GGTTAAACATTAA----
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACACABTAABCAH
--TCATCAATCA-
 C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACACABTAABCAH
CTCACACAATGGCGC-
 A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACACABTAABCAH
AATAAACAATN-----
 A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACACABTAABCAH
-GACAATGNN---
 C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:6
Score:0.56
Offset:-9
Orientation:reverse strand
Alignment:---------ACACABTAABCAH
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACACABTAABCAH---
AGTTATTAATGAGGTC
 C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACACABTAABCAH
RGCCATYAATCA-
 C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACABTAABCAH
GTAAACAAT------
 A C G T A C G T C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACACABTAABCAH
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A G T C A C G T C T G A C G T A A G T C A T G C C G T A G A C T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T