Information for 2-GAADGGBTCCAAGGAA (Motif 2)

A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A
Reverse Opposite:
A G C T A C G T A G T C G T A C A G C T A C G T A C T G A C T G C G T A T A G C A G T C A G T C G A T C A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.761
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.2 +/- 18.0bp
Average Position of motif in Background62.8 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAADGGBTCCAAGGAA
GGCGAGGGGTCAAGGGC-
 A C G T A C G T A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAADGGBTCCAAGGAA
CTCCAGGGGTCAATTGA-
 A C G T A C G T A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAADGGBTCCAAGGAA
-CAAAGGTCAAGGG--
 A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAADGGBTCCAAGGAA
GGAGAAAGGTGCGA-----
 A C G T A C G T A C G T A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAADGGBTCCAAGGAA-
--AGNGTTCTAATGANN
 A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A A C G T
A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAADGGBTCCAAGGAA
NTNNNGGGGTCANGNNN-
 A C G T A C G T A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAADGGBTCCAAGGAA-
---GGGGTCAAAGGTCA
 A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A A C G T
A C G T A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GAADGGBTCCAAGGAA--
------TTCTNNAGAANT
 A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAADGGBTCCAAGGAA-
---GGGGTCAAAGGTCA
 A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A A C G T
A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAADGGBTCCAAGGAA-
---GGGGTCAAAGGTCA
 A C T G G T C A C G T A C A T G A C T G A C T G A C T G A C G T G T A C G T A C G T C A C T G A A C T G A C T G G T C A T C G A A C G T
A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A