Information for 4-TTGGAGAAGGACT (Motif 9)

G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
Reverse Opposite:
C G T A A C T G G A C T T A G C A G T C G C A T A C G T A T G C G C A T A G T C A G T C T G C A C G T A
p-value:1e-10
log p-value:-2.347e+01
Information Content per bp:1.704
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif404.1
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets55.2 +/- 25.8bp
Average Position of motif in Background48.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTGGAGAAGGACT
-TGGGGAAGGGCM
 G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGGAGAAGGACT--
TGCGGAGTGGGACTGG
 A C G T G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAGAAGGACT-
NNAGGGACAAGGGCNC
 A C G T A C G T G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTGGAGAAGGACT
----NGAAGC---
 G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTGGAGAAGGACT---
------AAGCACTTAA
 G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGAAGGACT
GTGGGGGAGGGG--
 A C G T G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTGGAGAAGGACT
--NNATAAGGNN-
 G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TTGGAGAAGGACT
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTGGAGAAGGACT
ANAGATAAGAA--
 G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TTGGAGAAGGACT
-CAGATAAGGN--
 G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T