Information for 8-TAGAGAGGTA (Motif 19)

A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T C G T A
p-value:1e-6
log p-value:-1.592e+01
Information Content per bp:1.959
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 23.1bp
Average Position of motif in Background50.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGGTA
BTBRAGTGSN-
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGGTA
TTGAGTGSTT
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGGTA
CTYRAGTGSY-
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGGTA
CTTGAGTGGCT
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGGTA
GGTTAGAGACCT-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGGTA---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGGTA---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGGTA---
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAGAGAGGTA----------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGGTA---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T