Information for 4-CATAAACCTT (Motif 8)

G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
Reverse Opposite:
T C G A G T C A C T A G A T C G A C G T A C G T G A C T T C G A A C G T A C T G
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.838
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.1 +/- 26.1bp
Average Position of motif in Background51.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CATAAACCTT
NGYCATAAAWCH-
 A C G T A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATAAACCTT-
AATAAACAATN
 G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATAAACCTT
GCAATAAAA---
 A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CATAAACCTT
GGCCATAAATCA-
 A C G T A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATAAACCTT
GTCATAAAAN--
 A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CATAAACCTT
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CATAAACCTT
AAGCCATAAAA---
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATAAACCTT
GCCATAAATCA-
 A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CATAAACCTT
GGCCATAAATCAC
 A C G T A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CATAAACCTT
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T C T G A G T C A C G T A A T G C A G T C A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T