Information for 5-AGGGAAGCAAGGC (Motif 10)

C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C G T A C A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.936
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 15.1bp
Average Position of motif in Background34.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGCAAGGC---
GGAAGGAAGGAAGGAAGG
 A C G T A C G T C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGGGAAGCAAGGC
--NGAAGC-----
 C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGGAAGCAAGGC
AACAAGGAAGTAA---
 A C G T A C G T A C G T C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGGAAGCAAGGC
SCAGYCADGCATGAC
 A C G T A C G T C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGGAAGCAAGGC
ATGTAAACADGS-
 C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGAAGCAAGGC
NNNNGGGGGAAGANGG--
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGGGAAGCAAGGC----
-------CAAGGHCANV
 C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGGAAGCAAGGC
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGGGAAGCAAGGC
CAAACGTAAACAAT--
 A C G T A C G T A C G T C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGGAAGCAAGGC
--GTAAACAA---
 C G T A C T A G A C T G A C T G C G T A C G T A C T A G A G T C C G T A C G T A A C T G A C T G G T A C
A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T